STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A178DNU0Glyco_hydro_cc domain-containing protein. (294 aa)    
Predicted Functional Partners:
A0A178E769
Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
   
 0.773
A0A178EAE1
Ribosomal protein L10e.
   
 0.591
A0A178EHZ3
WW domain-containing protein.
   
 0.591
A0A178EIK9
Fes1-domain-containing protein.
   
 0.591
A0A178E531
50S ribosomal protein-like protein L2.
   
 
 0.528
A0A178DKZ8
RabGAP/TBC.
    
   0.527
A0A178DST0
L51_S25_CI-B8 domain-containing protein.
    
   0.527
A0A178DT00
37S ribosomal protein Mrp17.
    
   0.527
A0A178DX50
50S ribosomal subunit L30.
    
   0.527
A0A178DXQ6
MRP-L47-domain-containing protein.
    
   0.527
Your Current Organism:
Pyrenochaeta sp. DS3sAY3a
NCBI taxonomy Id: 765867
Other names: P. sp. DS3sAY3a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.