STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A178DNZ3Uncharacterized protein. (241 aa)    
Predicted Functional Partners:
A0A178E2L5
Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.
    
 0.995
A0A178E2R2
RNA-binding domain-containing protein.
    
 0.995
A0A178DT05
Prp19-domain-containing protein.
    
 0.992
A0A178E554
TPR-like protein.
   
 
 0.991
A0A178EEG6
TPR-like protein.
    
 0.990
A0A178DX33
Pre-mRNA-splicing factor ISY1.
    
  0.987
A0A178E165
RRM domain-containing protein.
   
 
 0.980
A0A178E8E3
Cell cycle control protein cwf14.
     
 0.980
A0A178DR63
PROCN-domain-containing protein.
    
   0.918
A0A178EIC3
DUF382-domain-containing protein.
    
   0.916
Your Current Organism:
Pyrenochaeta sp. DS3sAY3a
NCBI taxonomy Id: 765867
Other names: P. sp. DS3sAY3a
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