STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A178DPS4Uncharacterized protein. (650 aa)    
Predicted Functional Partners:
A0A178EGC2
Syntaxin-binding protein-like protein 2; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.511
A0A178DI73
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
    
 0.449
A0A178E439
Cu,Zn superoxide dismutase-like protein.
    
 0.449
A0A178EAL3
Tricorn protease domain 2-containing protein.
   
 
  0.435
A0A178DXG7
RPOL9 domain-containing protein.
    
  0.419
A0A178ECK9
Calponin-homology (CH) domain-containing protein.
   
 
 0.415
A0A178DU39
PH domain-like protein.
    
  0.402
A0A178EFS3
Nucleic acid-binding protein.
   
 
  0.402
A0A178EEC6
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
  0.400
Your Current Organism:
Pyrenochaeta sp. DS3sAY3a
NCBI taxonomy Id: 765867
Other names: P. sp. DS3sAY3a
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