STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A178DPW5Uncharacterized protein. (901 aa)    
Predicted Functional Partners:
A0A178EIH0
Autophagy-related protein.
    
  0.669
A0A178DK30
Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 0.647
A0A178EKI1
Peptidase C50 domain-containing protein.
    
 0.611
A0A178EE96
ARM repeat-containing protein.
    
 
 0.596
A0A178E632
ANK_REP_REGION domain-containing protein.
    
 0.565
A0A178EF21
Serine/threonine-protein phosphatase.
    
  0.527
A0A178EIY7
Metallo-dependent phosphatase.
    
  0.527
A0A178E7X2
NAD-dependent protein deacetylase; Belongs to the sirtuin family. Class I subfamily.
    
  0.512
A0A178E1P6
ADP-ribosylation factor-like protein-like protein 1; Belongs to the small GTPase superfamily. Arf family.
    
  0.508
A0A178EKN1
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.497
Your Current Organism:
Pyrenochaeta sp. DS3sAY3a
NCBI taxonomy Id: 765867
Other names: P. sp. DS3sAY3a
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