STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A178DPW6Zn(II)2Cys6 transcriptional activator. (780 aa)    
Predicted Functional Partners:
A0A178E0S2
Timeless-domain-containing protein.
    
 0.836
A0A178EMQ1
Casein kinase I isoform epsilon; Belongs to the protein kinase superfamily.
    
 0.828
A0A178E3P2
Uncharacterized protein.
  
 
 0.749
A0A178E470
Uncharacterized protein.
    
 0.707
A0A178DPJ0
FunK1 protein kinase.
    
 0.690
A0A178EC14
Kinase-like protein.
    
 0.690
A0A178DM39
Uncharacterized protein.
    
 0.674
A0A178DY05
PAS domain-containing protein.
    
 0.674
A0A178EB68
RNI-like protein.
    
 0.564
A0A178EMZ1
RNI-like protein.
    
 0.564
Your Current Organism:
Pyrenochaeta sp. DS3sAY3a
NCBI taxonomy Id: 765867
Other names: P. sp. DS3sAY3a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.