STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A178DRC7Uncharacterized protein. (550 aa)    
Predicted Functional Partners:
A0A178EAH9
Uncharacterized protein.
   
 0.996
A0A178EKN1
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.996
A0A178DN94
Thyroid hormone receptor interactor 12.
   
 0.995
A0A178E319
Uncharacterized protein.
    
 
 0.987
A0A178DYL3
Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.
    
  0.980
A0A178EBY8
Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.
    
  0.980
A0A178DNG4
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.979
A0A178DY97
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.979
A0A178E7T9
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.979
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
  0.978
Your Current Organism:
Pyrenochaeta sp. DS3sAY3a
NCBI taxonomy Id: 765867
Other names: P. sp. DS3sAY3a
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