STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A178DRQ3Cullin-domain-containing protein; Belongs to the cullin family. (879 aa)    
Predicted Functional Partners:
A0A178EEH6
DNA damage-binding protein 1.
  
 0.999
A0A178DRL1
WD repeat-containing protein-like protein.
    
 0.997
A0A178DRW5
TIP120-domain-containing protein.
  
 0.985
A0A178E778
RING-box protein 1.
    
 0.983
A0A178DME0
DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.
    
 0.971
A0A178E0Y7
Mov34-domain-containing protein.
    
 0.966
A0A178EJQ7
COP9 signalosome-like protein complex subunit 4.
  
 
 0.966
A0A178E9U6
PCI-domain-containing protein.
  
 
 0.956
A0A178DXC2
MPN domain-containing protein.
    
 0.949
A0A178ELE6
WD40 repeat-like protein.
    
 0.940
Your Current Organism:
Pyrenochaeta sp. DS3sAY3a
NCBI taxonomy Id: 765867
Other names: P. sp. DS3sAY3a
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