STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A178DRR3Importin subunit alpha; Belongs to the importin alpha family. (555 aa)    
Predicted Functional Partners:
A0A178EJR0
Importin subunit beta-1.
   
 0.999
A0A178EHM9
Cse1-domain-containing protein.
  
 0.993
A0A178DJW8
Nuclear cap-binding protein subunit 2.
    
 
 0.977
A0A178E025
RCC1/BLIP-II protein.
   
 
 0.968
A0A178EG80
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.947
A0A178E5K1
Cap binding protein.
   
 
 0.943
A0A178EFU2
ULP_PROTEASE domain-containing protein.
    
 
 0.931
A0A178DXV3
Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family.
    
   0.916
A0A178DPF5
Uncharacterized protein.
    
 0.899
A0A178E1Z9
Area protein.
    
 
 0.897
Your Current Organism:
Pyrenochaeta sp. DS3sAY3a
NCBI taxonomy Id: 765867
Other names: P. sp. DS3sAY3a
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