STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A178DS50Uncharacterized protein. (267 aa)    
Predicted Functional Partners:
A0A178EFY3
WD40 repeat-like protein.
    
 0.601
A0A178E0W9
Ash2-trithorax family protein.
    
 0.597
A0A178E3Q1
Kinase-like protein.
    
 0.594
A0A178EFK4
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.570
A0A178DPW7
UBA domain-containing protein.
    
  0.569
A0A178DYY5
Uncharacterized protein.
    
 0.567
A0A178E3J9
Sec13 protein-like protein; Belongs to the WD repeat SEC13 family.
    
 0.548
A0A178DYT6
Nucleoporin-domain-containing protein.
    
  0.530
A0A178DX73
Nucleoporin seh1; Belongs to the WD repeat SEC13 family.
    
 0.526
A0A178DJS6
Nuclear pore protein-like protein.
    
  0.519
Your Current Organism:
Pyrenochaeta sp. DS3sAY3a
NCBI taxonomy Id: 765867
Other names: P. sp. DS3sAY3a
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