STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A178DSF4Translation initiation factor-like protein IF-2. (1021 aa)    
Predicted Functional Partners:
A0A178EC72
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.988
A0A178EJM5
40s ribosomal protein-like protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.981
A0A178E1N4
Ribosomal protein L15.
   
 0.978
A0A178EJL8
40S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.
  
 0.978
A0A178DL17
Ribosomal_L18_c domain-containing protein.
   
 
 0.977
A0A178E515
60S ribosomal protein-like protein L23a.
   
 
 0.975
A0A178E5Y9
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
 0.975
A0A178DT00
37S ribosomal protein Mrp17.
   
 0.973
A0A178DVQ8
Uncharacterized protein.
  
 0.971
A0A178E531
50S ribosomal protein-like protein L2.
  
 0.969
Your Current Organism:
Pyrenochaeta sp. DS3sAY3a
NCBI taxonomy Id: 765867
Other names: P. sp. DS3sAY3a
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