STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A178DXB9Exoribonuclease. (291 aa)    
Predicted Functional Partners:
A0A178DKB6
ECR1_N domain-containing protein.
   
 0.999
A0A178DSL9
Uncharacterized protein.
   
 0.999
A0A178DUH3
RNase_PH domain-containing protein.
   
 0.999
A0A178E4S6
RNase_PH domain-containing protein.
   
 0.999
A0A178E7Q7
Exoribonuclease family protein.
   
 0.999
A0A178EM86
Uncharacterized protein.
   
 0.999
A0A178ENL5
Exosome complex exonuclease RRP41.
   
 0.999
A0A178EGP0
Exoribonuclease family protein.
   
 0.998
A0A178E3U1
RNB-domain-containing protein; Belongs to the RNR ribonuclease family.
   
 0.997
A0A178ENR8
Uncharacterized protein.
   
 0.997
Your Current Organism:
Pyrenochaeta sp. DS3sAY3a
NCBI taxonomy Id: 765867
Other names: P. sp. DS3sAY3a
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