STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A178DXR4U-box-domain-containing protein. (291 aa)    
Predicted Functional Partners:
A0A178E272
Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.970
A0A178DS59
Ubiquitin-conjugating enzyme.
    
 0.961
A0A178E9B7
Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.961
A0A178DV26
Heat shock protein Hsp88.
    
 
 0.916
A0A178DS68
Flavin_Reduct domain-containing protein.
    
 0.872
A0A178EGD2
Uncharacterized protein.
    
 0.872
A0A178EN60
HSP90-domain-containing protein.
    
 0.872
A0A178EKN1
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.843
A0A178EJ86
Ubiquitin conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.841
A0A178E9K6
Heat shock 70 kDa protein; Belongs to the heat shock protein 70 family.
    
 
 0.824
Your Current Organism:
Pyrenochaeta sp. DS3sAY3a
NCBI taxonomy Id: 765867
Other names: P. sp. DS3sAY3a
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