STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A178DYY8TPR-like protein. (689 aa)    
Predicted Functional Partners:
A0A178DXY8
CDC73-domain-containing protein.
    
 0.618
A0A178DV86
TPR-like protein.
    
 0.615
A0A178E6F0
Uncharacterized protein.
    
 0.614
A0A178ELV8
Uncharacterized protein.
    
 0.614
A0A178EKV8
Galactose-binding like protein.
    
 0.613
A0A178EFY1
Uncharacterized protein.
    
 0.612
A0A178ELT7
ANAPC5 domain-containing protein.
    
 0.609
A0A178DTB3
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.604
A0A178ED60
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.602
A0A178E9J2
SPT16-domain-containing protein.
    
  0.561
Your Current Organism:
Pyrenochaeta sp. DS3sAY3a
NCBI taxonomy Id: 765867
Other names: P. sp. DS3sAY3a
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