Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A178DT33 | A0A178DUN2 | A0A178DT33 | A0A178DUN2 | Ebp2-domain-containing protein. | Ribosomal protein L1. | 0.992 |
A0A178DT33 | A0A178DVN6 | A0A178DT33 | A0A178DVN6 | Ebp2-domain-containing protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.990 |
A0A178DT33 | A0A178DW42 | A0A178DT33 | A0A178DW42 | Ebp2-domain-containing protein. | Ribosome assembly protein-like protein Noc2. | 0.991 |
A0A178DT33 | A0A178DYI5 | A0A178DT33 | A0A178DYI5 | Ebp2-domain-containing protein. | RRM domain-containing protein. | 0.994 |
A0A178DT33 | A0A178E6G8 | A0A178DT33 | A0A178E6G8 | Ebp2-domain-containing protein. | Nucleolar GTP-binding protein-like protein 2. | 0.999 |
A0A178DT33 | A0A178E7Q3 | A0A178DT33 | A0A178E7Q3 | Ebp2-domain-containing protein. | ATP-dependent RNA helicase MSS116, mitochondrial. | 0.924 |
A0A178DT33 | ERB1 | A0A178DT33 | A0A178E5I8 | Ebp2-domain-containing protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.995 |
A0A178DT33 | NOP7 | A0A178DT33 | A0A178EN40 | Ebp2-domain-containing protein. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.999 |
A0A178DT33 | SPB1 | A0A178DT33 | A0A178DZ25 | Ebp2-domain-containing protein. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.990 |
A0A178DT33 | YTM1 | A0A178DT33 | A0A178EC02 | Ebp2-domain-containing protein. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.995 |
A0A178DUN2 | A0A178DT33 | A0A178DUN2 | A0A178DT33 | Ribosomal protein L1. | Ebp2-domain-containing protein. | 0.992 |
A0A178DUN2 | A0A178DVN6 | A0A178DUN2 | A0A178DVN6 | Ribosomal protein L1. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.991 |
A0A178DUN2 | A0A178DW42 | A0A178DUN2 | A0A178DW42 | Ribosomal protein L1. | Ribosome assembly protein-like protein Noc2. | 0.990 |
A0A178DUN2 | A0A178DYI5 | A0A178DUN2 | A0A178DYI5 | Ribosomal protein L1. | RRM domain-containing protein. | 0.998 |
A0A178DUN2 | A0A178E6G8 | A0A178DUN2 | A0A178E6G8 | Ribosomal protein L1. | Nucleolar GTP-binding protein-like protein 2. | 0.992 |
A0A178DUN2 | A0A178E7Q3 | A0A178DUN2 | A0A178E7Q3 | Ribosomal protein L1. | ATP-dependent RNA helicase MSS116, mitochondrial. | 0.920 |
A0A178DUN2 | ERB1 | A0A178DUN2 | A0A178E5I8 | Ribosomal protein L1. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.992 |
A0A178DUN2 | NOP7 | A0A178DUN2 | A0A178EN40 | Ribosomal protein L1. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.988 |
A0A178DUN2 | SPB1 | A0A178DUN2 | A0A178DZ25 | Ribosomal protein L1. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.987 |
A0A178DUN2 | YTM1 | A0A178DUN2 | A0A178EC02 | Ribosomal protein L1. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.992 |
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