STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178A780Uncharacterized protein. (311 aa)    
Predicted Functional Partners:
A0A178AEH8
E3 ubiquitin-protein ligase.
    
 
 0.667
A0A178AX72
Uncharacterized protein.
    
 
 0.527
A0A178AYW9
Non-specific serine/threonine protein kinase.
    
 
 0.527
A0A178AG34
CBS-domain-containing protein.
    
   0.518
A0A178A701
Thioredoxin domain-containing protein.
    
 0.507
A0A178ACU9
Thioredoxin-like protein.
    
 0.507
A0A178B390
Thioredoxin-domain-containing protein.
    
 0.507
A0A178ARL9
UEV-domain-containing protein.
    
   0.501
A0A178AJW7
HCP-like protein.
    
   0.453
A0A178BF85
Uncharacterized protein.
    
   0.444
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.