Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178A7T0Uncharacterized protein. (470 aa)    
Predicted Functional Partners:
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.494
A0A178ACH5
Uncharacterized protein.
  
 
  0.476
A0A178B6K9
WD40 repeat-like protein.
   
  0.475
A0A178AKW7
rRNA processing protein Ipi1.
    
 0.467
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.467
A0A178AM35
CP-type G domain-containing protein.
   
  0.463
A0A178B371
Cysteine proteinase.
    
  0.436
A0A178AQ67
CLP1_P domain-containing protein.
    
  0.431
A0A178APK0
Ribosomal protein L2.
    
  0.430
A0A178AKD5
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
    
  0.426
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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