Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
A0A178A7U2ANK_REP_REGION domain-containing protein. (1070 aa)    
Predicted Functional Partners:
A0A178ADT3
ClpP/crotonase.
    
 0.743
A0A178AE02
Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.743
A0A178AGB4
Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.743
A0A178B2I1
ClpP/crotonase.
    
 0.743
A0A178BBH6
ClpP/crotonase.
    
 0.739
A0A178BAV4
Uncharacterized protein.
   
 0.708
A0A178AUT8
Acyl-CoA dehydrogenase NM domain-like protein.
   
 0.694
A0A178AXX9
Peroxin-3.
     
 0.691
A0A178B786
Glycylpeptide N-tetradecanoyltransferase; Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins; Belongs to the NMT family.
    
 
 0.653
A0A178ABH2
LACT-domain-containing protein.
     
 0.641
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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