Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
A0A178A835L51_S25_CI-B8 domain-containing protein. (199 aa)    
Predicted Functional Partners:
A0A178AWU8
Ribosomal protein S16.
   
 0.997
A0A178AM36
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
 0.995
A0A178ACZ6
Ribosomal protein S2.
   
 0.994
A0A178B7B4
Glucocorticoid receptor-like (DNA-binding domain).
   
 0.994
A0A178AML1
Translational machinery component.
   
 0.993
A0A178B015
Ribosomal protein-like protein S15.
   
 0.993
A0A178B370
Ribosomal protein S12.
   
 0.993
A0A178AC53
30S ribosomal protein-like protein S10.
   
 0.992
A0A178B725
37S ribosomal protein Mrp17.
   
 0.992
A0A178BA93
MRP-S28 domain-containing protein.
   
  0.992
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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