Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178A836Csm1 domain-containing protein. (756 aa)    
Predicted Functional Partners:
A0A178B637
Kinase-like protein; Belongs to the protein kinase superfamily.
    
 0.939
A0A178B4Z7
Uncharacterized protein.
    
 0.926
A0A178B2T8
ULP_PROTEASE domain-containing protein.
    
 
 0.863
A0A178AEB5
Cysteine proteinase; Belongs to the peptidase C2 family.
    
 
 0.859
A0A178AEZ0
Phosphatases II.
    
 
 0.859
A0A178AEV2
Structural maintenance of chromosomes protein.
    
 
 0.824
A0A178AYM2
Uncharacterized protein.
    
 
 0.785
A0A178AIS9
Uncharacterized protein.
    
 0.674
A0A178AUG5
Uncharacterized protein.
    
 0.674
A0A178AHL7
Uncharacterized protein.
    
 0.660
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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