STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A178A860Uncharacterized protein. (387 aa)    
Predicted Functional Partners:
A0A178AJS2
Uncharacterized protein.
    
 0.872
A0A178AZY1
Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation.
    
 0.872
A0A178AIX9
TFIID-31kDa-domain-containing protein.
   
 0.871
A0A178AQJ9
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.870
A0A178AMS8
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.869
A0A178AHT8
SCA7-domain-containing protein.
    
 0.859
A0A178AG71
SGF29 C-terminal domain-containing protein.
    
 0.828
A0A178AXN0
TFIID-18kDa-domain-containing protein.
    
 0.813
A0A178ABF0
Transcription initiation factor TFIID subunit 5.
    
 0.787
A0A178ASG4
TAF-domain-containing protein.
    
 0.785
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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