Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178A883Cullin-domain-containing protein; Belongs to the cullin family. (880 aa)    
Predicted Functional Partners:
A0A178B449
DNA damage-binding protein 1.
  
 0.997
A0A178AZC1
RING/U-box.
    
 0.994
A0A178B5T0
WD repeat-containing protein-like protein.
    
 0.994
A0A178B8C5
WD40 repeat-like protein.
    
 0.989
A0A178B962
WD40 repeat-like protein.
    
 0.988
A0A178B631
TIP120-domain-containing protein.
  
 
 0.983
A0A178AB72
WD repeat-containing protein.
    
 0.981
A0A178BE79
PCI domain-containing protein.
    
 0.979
A0A178AAE7
COP9 signalosome-like protein complex subunit 1.
  
 0.978
A0A178AP30
Ubiquitin.
    
 0.976
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.