Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178A886Uncharacterized protein. (364 aa)    
Predicted Functional Partners:
A0A178AQA7
Glucose-repressible alcohol dehydrogenase-like protein transcriptional effector.
    
 
 0.898
A0A178AY30
Cap binding protein.
    
 0.860
IQ06DRAFT_1456
TPR-like protein.
    
 0.856
A0A178B3D8
RNA-binding domain-containing protein.
    
 0.851
A0A178A8T6
Nuclear cap-binding protein subunit 2.
    
 0.846
A0A178B8D8
Translation initiation factor Eif4e; Belongs to the eukaryotic initiation factor 4E family.
   
 
 0.813
A0A178BC78
RNA-binding domain-containing protein.
    
 0.809
A0A178A8I3
RNA-binding domain-containing protein.
   
 0.807
A0A178AN27
Brix-domain-containing protein.
   
   0.807
A0A178B057
ARM repeat-containing protein.
   
   0.800
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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