Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178A8D4Uncharacterized protein. (378 aa)    
Predicted Functional Partners:
A0A178B057
ARM repeat-containing protein.
    
   0.919
A0A178AK03
Uncharacterized protein.
    
 
 0.766
A0A178AL64
Uncharacterized protein.
    
 
 0.726
A0A178BDF2
RNA polymerase I-specific transcription initiation factor RRN3.
      
 0.665
A0A178AMK4
Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family.
      
 0.647
A0A178AJP4
HMG box domain-containing protein.
      
 0.643
A0A178AMN3
Rxt3-domain-containing protein.
    
   0.612
A0A178AUF5
Diphthine synthase.
      
 0.516
A0A178ANX9
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
    
   0.505
A0A178ASQ2
Kinase-like protein.
      
 0.477
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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