Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
A0A178A8R4PLP-dependent transferase. (567 aa)    
Predicted Functional Partners:
A0A178B2I2
PAP2-domain-containing protein.
    
 0.990
A0A178AAL7
Sphingoid long chain base kinase-like protein.
   
 0.967
A0A178AWG6
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.855
A0A178ALG7
Tryptophan synthase.
    
 0.836
PSD1
Phosphatidylserine decarboxylase proenzyme 1, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily.
    
 
 0.801
A0A178A8K8
Serine palmitoyltransferase 2.
    
 
 0.796
A0A178B107
Nucleotidylyl transferase.
  
 
 0.789
A0A178A9Z7
GDPD-domain-containing protein.
   
 0.768
A0A178AP27
Gamma-glutamyl phosphate reductase.
    
 0.737
A0A178AK65
Aspartate aminotransferase.
     
 0.730
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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