A0A178A911 protein (Stagonospora sp. SRC1lsM3a)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A178A911

Uncharacterized protein. (173 aa)

Predicted Functional Partners:

A0A178AW70

0.938

A0A178AC15

0.866

A0A178B1F4

0.859

A0A178AXA5

0.836

GET3

0.747

GET1

0.746

A0A178B6U3

0.671

A0A178AZ43

0.652

A0A178AHK2

0.651

A0A178AID2

0.646

Your Current Organism:

Stagonospora sp. SRC1lsM3a

NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A178A911	A0A178AC15	A0A178A911	A0A178AC15	Uncharacterized protein.	Inorganic phosphate transport PHO88.	0.866
A0A178A911	A0A178AHK2	A0A178A911	A0A178AHK2	Uncharacterized protein.	Uncharacterized protein.	0.651
A0A178A911	A0A178AID2	A0A178A911	A0A178AID2	Uncharacterized protein.	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	0.646
A0A178A911	A0A178AW70	A0A178A911	A0A178AW70	Uncharacterized protein.	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	0.938
A0A178A911	A0A178AXA5	A0A178A911	A0A178AXA5	Uncharacterized protein.	Uncharacterized protein.	0.836
A0A178A911	A0A178AZ43	A0A178A911	A0A178AZ43	Uncharacterized protein.	Microsomal signal peptidase 12 kDa subunit.	0.652
A0A178A911	A0A178B1F4	A0A178A911	A0A178B1F4	Uncharacterized protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.859
A0A178A911	A0A178B6U3	A0A178A911	A0A178B6U3	Uncharacterized protein.	SecY protein.	0.671
A0A178A911	GET1	A0A178A911	A0A178AE48	Uncharacterized protein.	Protein GET1; Required for the post-translational delivery of tail-anchored (TA) proteins to the endoplasmic reticulum. Acts as a membrane receptor for soluble GET3, which recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol.	0.746
A0A178A911	GET3	A0A178A911	A0A178AGQ4	Uncharacterized protein.	ATPase GET3; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. S [...]	0.747
A0A178AC15	A0A178A911	A0A178AC15	A0A178A911	Inorganic phosphate transport PHO88.	Uncharacterized protein.	0.866
A0A178AC15	A0A178B6U3	A0A178AC15	A0A178B6U3	Inorganic phosphate transport PHO88.	SecY protein.	0.857
A0A178AC15	GET3	A0A178AC15	A0A178AGQ4	Inorganic phosphate transport PHO88.	ATPase GET3; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. S [...]	0.452
A0A178AHK2	A0A178A911	A0A178AHK2	A0A178A911	Uncharacterized protein.	Uncharacterized protein.	0.651
A0A178AHK2	A0A178AZ43	A0A178AHK2	A0A178AZ43	Uncharacterized protein.	Microsomal signal peptidase 12 kDa subunit.	0.489
A0A178AID2	A0A178A911	A0A178AID2	A0A178A911	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	Uncharacterized protein.	0.646
A0A178AID2	A0A178AZ43	A0A178AID2	A0A178AZ43	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	Microsomal signal peptidase 12 kDa subunit.	0.883
A0A178AID2	A0A178B6U3	A0A178AID2	A0A178B6U3	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	SecY protein.	0.996
A0A178AID2	GET1	A0A178AID2	A0A178AE48	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	Protein GET1; Required for the post-translational delivery of tail-anchored (TA) proteins to the endoplasmic reticulum. Acts as a membrane receptor for soluble GET3, which recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol.	0.814
A0A178AID2	GET3	A0A178AID2	A0A178AGQ4	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	ATPase GET3; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. S [...]	0.913