Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178A970B-block_TFIIIC domain-containing protein. (2457 aa)    
Predicted Functional Partners:
A0A178ACV6
TPR-like protein.
   
 0.999
A0A178ARG4
Transcription factor tfiiic complex a box associated subunit sfc1.
   
 0.999
A0A178AV81
Uncharacterized protein.
    
 0.999
A0A178AAW0
SANT domain-containing protein.
    
 0.998
A0A178ASQ6
BRF1-domain-containing protein.
    
 0.998
A0A178A7C8
Phosphoglycerate mutase family protein.
    
 0.987
A0A178AXX4
Uncharacterized protein.
    
  0.975
A0A178B6V2
Uncharacterized protein.
    
 0.965
A0A178AFB8
TBP-domain-containing protein.
    
 0.963
A0A178AEV2
Structural maintenance of chromosomes protein.
   
 0.873
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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