Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178A998PalH-domain-containing protein. (773 aa)    
Predicted Functional Partners:
IQ06DRAFT_4209
Arrestin_C domain-containing protein.
  
 
 
 0.857
A0A178B9S5
Pali-domain-containing protein.
    
 0.797
A0A178ALE4
Uncharacterized protein.
   
 0.689
A0A178B2X2
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.689
A0A178B592
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.689
A0A178BEQ4
P/Homo B domain-containing protein; Belongs to the peptidase S8 family.
    
 0.657
A0A178ARH9
Uncharacterized protein.
   
 0.648
A0A178AHG7
Reticulon-like protein.
    
  0.638
A0A178AEL1
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.637
A0A178AVN9
Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.
    
   0.584
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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