Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
A0A178AA17tRNA ligase. (843 aa)    
Predicted Functional Partners:
A0A178B8S7
Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.
   
  
 0.777
A0A178BBB6
Uncharacterized protein.
      
 0.762
A0A178ALS4
2',3'-cyclic-nucleotide 3'-phosphodiesterase.
      
 0.757
A0A178ANR9
Uncharacterized protein.
      
 0.756
A0A178ATS7
BZIP domain-containing protein.
      
 0.672
A0A178BEX1
P-loop containing nucleoside triphosphate hydrolase protein.
      
 0.670
A0A178B1W8
tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...]
      
 0.669
A0A178AAZ9
ARM repeat-containing protein.
      
 0.652
A0A178APY1
Phenylalanyl-tRNA synthetase beta chain.
      
 0.652
A0A178AAL5
tRNA_int_end_N2 domain-containing protein.
      
 0.643
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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