Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AA24Uncharacterized protein. (731 aa)    
Predicted Functional Partners:
A0A178AMH5
SNF5-domain-containing protein.
    
 0.495
A0A178AEH8
E3 ubiquitin-protein ligase.
    
  0.487
A0A178AJ31
Uncharacterized protein.
    
  0.483
A0A178A7F7
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.481
A0A178AAY9
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.481
A0A178AFD6
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.481
A0A178B8J5
Uncharacterized protein.
    
  0.473
A0A178AS64
Amidase signature enzyme.
    
  0.445
A0A178AN82
SKIP_SNW domain-containing protein.
    
  0.444
A0A178AUE5
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.443
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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