Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AA67Uncharacterized protein. (386 aa)    
Predicted Functional Partners:
A0A178A9Z7
GDPD-domain-containing protein.
    
  0.760
A0A178B3V9
Uncharacterized protein.
    
  0.749
A0A178BBU9
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.749
A0A178AJW4
NUC189-domain-containing protein.
   
 0.612
A0A178AEG5
Uncharacterized protein.
    
  0.586
A0A178B8U7
Small nucleolar ribonucleo protein-like protein complex subunit.
    
 0.568
A0A178ASZ4
WD40 repeat-like protein.
   
  0.556
A0A178AX88
Heme peroxidase.
    
 0.505
A0A178BC37
DAGAT-domain-containing protein.
   
 
 0.479
A0A178APR5
WD40 repeat-like protein.
   
  0.470
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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