Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AAF5Uncharacterized protein. (1913 aa)    
Predicted Functional Partners:
A0A178BBA4
Glycoside hydrolase.
   
 
 0.917
A0A178AK43
Nucleotide-diphospho-sugar transferase.
   
 
 0.887
A0A178AFN8
Nucleotide-diphospho-sugar transferase.
    
  0.879
A0A178B6A9
UTP--glucose-1-phosphate uridylyltransferase.
     
  0.874
A0A178BCZ7
Chitinase 1; Belongs to the glycosyl hydrolase 18 family.
     
 0.873
A0A178AKK0
Uncharacterized protein.
     
  0.864
A0A178BCZ4
Chitin synthase 4.
    
 0.861
A0A178AS57
Uncharacterized protein.
   
 
 0.845
A0A178ACF8
Glyco_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
     
 0.804
A0A178AGS4
Uncharacterized protein.
    
  0.774
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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