Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AAP3Uncharacterized protein. (304 aa)    
Predicted Functional Partners:
A0A178B2P7
5-formyltetrahydrofolate cyclo-ligase.
     
 0.938
A0A178AXV1
FTHFS-domain-containing protein.
   
 0.931
IQ06DRAFT_7190
NAD(P)-binding protein.
    
 0.923
A0A178AHI3
Phosphoribosylglycinamide formyltransferase.
    
 0.895
A0A178ACR7
Nop-domain-containing protein.
   
    0.894
A0A178B7N1
NIPSNAP-domain-containing protein.
   
    0.893
A0A178ADP2
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
    0.892
A0A178APR5
WD40 repeat-like protein.
   
    0.891
A0A178ACH4
Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly.
   
    0.842
A0A178B966
Uncharacterized protein.
  
    0.778
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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