Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AAP6HLH transcription factor-like protein. (544 aa)    
Predicted Functional Partners:
A0A178A9P4
BZIP domain-containing protein.
    
 0.772
A0A178B6N5
Serine/threonine-protein phosphatase.
    
  0.764
A0A178ADM8
WD-repeat protein-like protein pop3.
    
 
 0.748
A0A178B6V6
EF-hand.
     
 0.730
A0A178AK83
Putative 14-3-3 protein like protein; Belongs to the 14-3-3 family.
    
 0.714
A0A178BC29
14-3-3 protein; Belongs to the 14-3-3 family.
    
 0.714
A0A178ACZ6
Ribosomal protein S2.
    
  0.650
A0A178B6N3
WD_REPEATS_REGION domain-containing protein.
    
 
 0.648
A0A178AEL5
Importin N-terminal domain-containing protein.
     
 0.643
A0A178ALX8
14-3-3 protein.
    
 0.634
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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