Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AAR7TMF_TATA_bd domain-containing protein. (904 aa)    
Predicted Functional Partners:
A0A178B569
ARF/SAR superfamily.
     
 0.801
A0A178AJZ6
HECT domain-containing protein.
      
 0.774
A0A178B3I1
Ras-domain-containing protein.
    
 0.768
A0A178B0K9
Vps52-domain-containing protein.
     
 0.732
A0A178BBH5
Vps53_N domain-containing protein.
     
 0.730
A0A178AD80
Uncharacterized protein.
     
 0.713
A0A178AVX4
General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.
      
 0.646
A0A178ASU7
ARF/SAR superfamily; Belongs to the small GTPase superfamily. Arf family.
     
  0.603
A0A178B9M5
Uncharacterized protein.
   
  
 0.584
A0A178A9Z9
Uncharacterized protein.
     
 0.561
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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