Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
A0A178AAS8Protein YOP1. (171 aa)    
Predicted Functional Partners:
SEY1
Protein SEY1; Cooperates with the reticulon proteins and tubule-shaping DP1 family proteins to generate and maintain the structure of the tubular endoplasmic reticulum network. Has GTPase activity, which is required for its function in ER organization; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily.
    
 
 0.983
A0A178AHG7
Reticulon-like protein.
    
 
 0.965
A0A178ARD2
Zinc_ribbon_10 domain-containing protein.
    
 
 0.928
A0A178AQG3
Uncharacterized protein.
    
 
 0.902
A0A178BAT9
PRA1 family protein.
   
   0.838
A0A178ARU9
Uncharacterized protein.
    
 
 0.767
A0A178ALR5
YIF1-domain-containing protein.
    
 
 0.754
A0A178AUX0
Uncharacterized protein.
      
 0.722
A0A178AZN2
Uncharacterized protein.
   
 
 0.719
A0A178BAY4
Uncharacterized protein.
   
   0.705
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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