A0A178AB07 protein (Stagonospora sp. SRC1lsM3a)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A178AB07

UDP-glucose:glyco protein glucosyltransferas-like protein. (1499 aa)

Predicted Functional Partners:

A0A178AWB4

0.964

A0A178BBG3

0.958

A0A178AV28

0.954

A0A178AIC4

0.926

A0A178AR08

0.926

A0A178B0U7

0.926

A0A178AZP6

0.900

A0A178AZJ4

0.892

A0A178B8Z4

0.854

A0A178B954

0.841

Your Current Organism:

Stagonospora sp. SRC1lsM3a

NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A178AB07	A0A178AIC4	UDP-glucose:glyco protein glucosyltransferas-like protein.	Alpha-glucosidase-like protein; Belongs to the glycosyl hydrolase 31 family.	0.926
A0A178AB07	A0A178AR08	UDP-glucose:glyco protein glucosyltransferas-like protein.	Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family.	0.926
A0A178AB07	A0A178AV28	UDP-glucose:glyco protein glucosyltransferas-like protein.	Uncharacterized protein.	0.954
A0A178AB07	A0A178AWB4	UDP-glucose:glyco protein glucosyltransferas-like protein.	Glycoside hydrolase.	0.964
A0A178AB07	A0A178AZJ4	UDP-glucose:glyco protein glucosyltransferas-like protein.	GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins which plays important roles in the quality control and ER-associated degradation of GPI-anchored proteins.	0.892
A0A178AB07	A0A178AZP6	UDP-glucose:glyco protein glucosyltransferas-like protein.	Alkaline phosphatase-like protein.	0.900
A0A178AB07	A0A178B0U7	UDP-glucose:glyco protein glucosyltransferas-like protein.	Alpha-xylosidase; Belongs to the glycosyl hydrolase 31 family.	0.926
A0A178AB07	A0A178B8Z4	UDP-glucose:glyco protein glucosyltransferas-like protein.	TGc domain-containing protein.	0.854
A0A178AB07	A0A178B954	UDP-glucose:glyco protein glucosyltransferas-like protein.	BIG1-domain-containing protein.	0.841
A0A178AB07	A0A178BBG3	UDP-glucose:glyco protein glucosyltransferas-like protein.	Calnexin-like protein.	0.958
A0A178AIC4	A0A178AB07	Alpha-glucosidase-like protein; Belongs to the glycosyl hydrolase 31 family.	UDP-glucose:glyco protein glucosyltransferas-like protein.	0.926
A0A178AIC4	A0A178AV28	Alpha-glucosidase-like protein; Belongs to the glycosyl hydrolase 31 family.	Uncharacterized protein.	0.859
A0A178AIC4	A0A178AWB4	Alpha-glucosidase-like protein; Belongs to the glycosyl hydrolase 31 family.	Glycoside hydrolase.	0.898
A0A178AIC4	A0A178AZJ4	Alpha-glucosidase-like protein; Belongs to the glycosyl hydrolase 31 family.	GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins which plays important roles in the quality control and ER-associated degradation of GPI-anchored proteins.	0.763
A0A178AIC4	A0A178AZP6	Alpha-glucosidase-like protein; Belongs to the glycosyl hydrolase 31 family.	Alkaline phosphatase-like protein.	0.859
A0A178AIC4	A0A178B954	Alpha-glucosidase-like protein; Belongs to the glycosyl hydrolase 31 family.	BIG1-domain-containing protein.	0.631
A0A178AIC4	A0A178BBG3	Alpha-glucosidase-like protein; Belongs to the glycosyl hydrolase 31 family.	Calnexin-like protein.	0.913
A0A178AR08	A0A178AB07	Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family.	UDP-glucose:glyco protein glucosyltransferas-like protein.	0.926
A0A178AR08	A0A178AV28	Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family.	Uncharacterized protein.	0.859
A0A178AR08	A0A178AWB4	Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family.	Glycoside hydrolase.	0.953