Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AB30Bromodomain-containing protein. (888 aa)    
Predicted Functional Partners:
A0A178AIG2
Uncharacterized protein.
   
 0.999
A0A178AV89
Uncharacterized protein.
    
 0.999
A0A178AM07
Uncharacterized protein.
    
 0.997
A0A178ARQ0
Uncharacterized protein; Belongs to the actin family.
  
 
 0.996
A0A178B1I0
Uncharacterized protein.
   
 0.991
A0A178AYY3
SWIRM-domain-containing protein.
   
 0.989
A0A178AI57
SWIB domain-containing protein.
    
 0.988
A0A178AMH5
SNF5-domain-containing protein.
   
 0.987
A0A178AWP3
SNF5-domain-containing protein.
   
 0.987
A0A178ACR6
Actin/actin-like protein; Belongs to the actin family.
   
 0.972
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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