Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
A0A178AB36Uncharacterized protein. (790 aa)    
Predicted Functional Partners:
A0A178AQV1
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
  
 
 0.920
A0A178ANS2
Inosine/uridine-preferring nucleoside hydrolase.
  
 
  0.882
A0A178AZG8
PRTase-like protein.
     
  0.874
A0A178BBP0
Cytidine deaminase-like protein.
     
  0.820
A0A178AGD4
Putative riboflavin biosynthesis protein Rib7.
  
 
 0.812
A0A178APN7
Uncharacterized protein.
  
 
  0.769
A0A178AZW6
Ribokinase-like protein.
  
 
 0.764
A0A178B8K5
Ribokinase-like protein.
  
 
 0.764
A0A178B4Y9
Uridine kinase; Belongs to the uridine kinase family.
     
  0.754
A0A178APQ2
Dihydroorotate dehydrogenase (fumarate); Catalyzes the conversion of dihydroorotate to orotate with fumarate as the electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily.
   
 
 0.705
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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