Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AB38Calponin-homology (CH) domain-containing protein. (1088 aa)    
Predicted Functional Partners:
A0A178B8C9
Kinesin-domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.955
A0A178AUK6
Uncharacterized protein.
   
 
 0.944
A0A178B253
DHR10 domain-containing protein.
   
  
 0.929
A0A178B3A9
Cnd3 domain-containing protein.
   
  
 0.924
IQ06DRAFT_3076
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.924
A0A178BA03
Uncharacterized protein.
   
  
 0.912
A0A178AV46
Uncharacterized protein.
   
  
 0.906
A0A178B761
Uncharacterized protein.
   
  
 0.874
A0A178B9G5
Peptidase C50 domain-containing protein.
   
 
 0.870
A0A178AIU4
UBC-like protein; Belongs to the ubiquitin-conjugating enzyme family.
   
  
 0.860
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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