Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AB77Uncharacterized protein. (266 aa)    
Predicted Functional Partners:
A0A178AR26
WD40 repeat-like protein.
    
 0.760
A0A178ARE4
Ribosomal protein L15.
    
 
 0.557
A0A178AGB3
Pkinase-domain-containing protein.
   
 0.544
A0A178AUZ5
Kinase-like protein.
   
 0.544
A0A178B9N7
Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.544
A0A178ARN8
Ribosomal protein L4.
    
 
 0.539
A0A178AV65
Ribosomal protein S18.
    
   0.520
A0A178B8X1
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
   0.512
A0A178AAN9
50S ribosomal protein L5.
    
   0.506
A0A178AB55
50S ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
    
 0.506
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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