Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
A0A178ABA5ClpP/crotonase. (298 aa)    
Predicted Functional Partners:
A0A178AVF0
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
  
 
 0.922
A0A178AB79
Pyruvate carboxyltransferase.
  
 
 0.901
A0A178AK86
Aldolase.
  
 
 0.901
A0A178AUR5
Acyl-CoA dehydrogenase NM domain-like protein.
 
 0.863
A0A178AKD0
ClpP/crotonase.
  
 
 0.848
A0A178AT90
Uncharacterized protein.
  
 
 0.848
A0A178A914
Methylcrotonoyl-CoA carboxylase subunit alpha mitochondrial.
  
 0.837
A0A178AKM5
Uncharacterized protein.
  
 0.837
A0A178AE02
Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.819
A0A178AGB4
Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.819
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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