Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ABE2Uncharacterized protein. (241 aa)    
Predicted Functional Partners:
A0A178B0L0
HET-domain-containing protein.
  
     0.449
A0A178AS21
HET-domain-containing protein.
  
     0.443
A0A178AJ46
HET-domain-containing protein.
  
     0.437
A0A178AG76
HET-domain-containing protein.
  
     0.429
A0A178B2P4
HET-domain-containing protein.
  
     0.428
A0A178APC3
HET-domain-containing protein.
  
     0.417
A0A178B1F1
HET-domain-containing protein.
  
     0.415
A0A178AV69
HET-domain-containing protein.
  
     0.414
A0A178A7D6
HET-domain-containing protein.
  
     0.412
A0A178BAF5
HET-domain-containing protein.
  
     0.411
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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