Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
A0A178ABK8Rho GTPase activation protein. (779 aa)    
Predicted Functional Partners:
A0A178AS57
Uncharacterized protein.
   
 0.956
A0A178A703
Ras-domain-containing protein.
    
 0.925
A0A178A8G5
Ras-domain-containing protein.
    
 0.925
A0A178AY04
Ras-domain-containing protein.
    
 0.925
A0A178AY67
Uncharacterized protein.
   
 
 0.897
A0A178B2M8
RhoGAP-domain-containing protein.
   
 0.793
A0A178B7A6
Septum-promoting GTP-binding protein 1.
    
 0.769
A0A178AZG8
PRTase-like protein.
    
  0.752
A0A178B4Y9
Uridine kinase; Belongs to the uridine kinase family.
    
  0.752
A0A178AHZ1
Uncharacterized protein.
    
 0.750
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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