Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
A0A178ABP9Clavaminate synthase-like protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (345 aa)    
Predicted Functional Partners:
A0A178AGQ6
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
   
 0.625
A0A178A8Q5
Uncharacterized protein.
    
 0.614
A0A178AC64
Uncharacterized protein.
      
 0.533
A0A178B0R5
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
   0.516
A0A178ACG3
Uncharacterized protein.
   
   0.507
A0A178AE36
ADP-ribosylation factor family protein; Belongs to the small GTPase superfamily. Arf family.
    
  0.488
A0A178B3U3
Amidase signature enzyme.
    
  0.414
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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