Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ABQ8Zn(2)-C6 fungal-type domain-containing protein. (804 aa)    
Predicted Functional Partners:
A0A178AAE0
WD40 repeat-like protein.
    
 0.896
A0A178ASS4
Nuclear matrix protein.
    
 0.896
A0A178BAU3
Uncharacterized protein.
   
 0.850
A0A178AVW6
Uncharacterized protein.
   
 0.837
A0A178AY30
Cap binding protein.
    
 0.831
A0A178AMA4
RRM domain-containing protein.
   
 0.819
A0A178AT19
Uncharacterized protein.
   
 0.819
A0A178BBI4
TAP-C domain-containing protein.
    
 0.800
A0A178A8T6
Nuclear cap-binding protein subunit 2.
    
 0.765
A0A178AQL2
Uncharacterized protein.
   
 0.762
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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