STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ABR5Uncharacterized protein. (586 aa)    
Predicted Functional Partners:
A0A178AFB6
HAD-superfamily hydrolase.
    
  0.557
A0A178ASW8
Phosphatidyl synthase-like protein.
    
  0.557
A0A178AZ13
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
  0.557
A0A178BA80
HAD-superfamily hydrolase.
    
  0.557
A0A178AZ53
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
  0.472
A0A178AW09
Ras-related protein rab-like protein-11B.
    
  0.451
A0A178B8B3
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
  0.440
A0A178B0G6
Uncharacterized protein.
    
 0.438
A0A178A9Z7
GDPD-domain-containing protein.
    
  0.437
A0A178BA50
WD40 repeat-like protein.
    
  0.437
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.