Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ABT5Uncharacterized protein. (112 aa)    
Predicted Functional Partners:
A0A178AYQ0
Uncharacterized protein.
   
 0.870
A0A178ALF2
Uncharacterized protein.
    
 0.789
A0A178BA42
SCO1 protein.
     
 0.775
A0A178BC36
Cytochrome c oxidase copper chaperone-like protein Cox17.
   
 
 0.769
A0A178AKE2
COX assembly mitochondrial protein; Required for mitochondrial cytochrome c oxidase (COX) assembly and respiration; Belongs to the CMC family.
   
 
 0.708
A0A178B971
Cytochrome c oxidase-assembly factor COX23, mitochondrial.
   
  
 0.665
A0A178AVJ1
Uncharacterized protein.
   
 
 0.646
A0A178AEU4
Uncharacterized protein.
   
 
 0.628
A0A178AIQ5
COX15-CtaA-domain-containing protein.
     
 0.601
A0A178B9A0
Uncharacterized protein.
     
 0.595
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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