Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
A0A178ABU3AAA-domain-containing protein; Belongs to the AAA ATPase family. (799 aa)    
Predicted Functional Partners:
A0A178AP79
DUF292-domain-containing protein.
    
 0.979
A0A178ASK1
Uncharacterized protein.
    
 0.971
A0A178ACP1
Uncharacterized protein.
    
 0.849
A0A178AQ52
Sec34-domain-containing protein.
   
 
  0.843
A0A178B3X9
Charged multivesicular body protein-like protein 6.
    
 0.840
A0A178AJU8
Uncharacterized protein.
    
 0.827
A0A178ALC3
Robl_LC7 domain-containing protein.
   
 
 0.824
A0A178ADG9
Tctex-1.
   
  0.820
A0A178AYC4
Dor1-domain-containing protein.
    
  0.820
A0A178BA50
WD40 repeat-like protein.
    
 0.812
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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