STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ABV1Membrane fusion mating protein FIG1. (270 aa)    
Predicted Functional Partners:
A0A178B8J5
Uncharacterized protein.
   
  0.501
A0A178A927
TRP_N domain-containing protein.
  
 
  0.445
A0A178AJ31
Uncharacterized protein.
    
  0.440
A0A178B7I2
RING-type domain-containing protein.
  
 
   0.434
A0A178AS64
Amidase signature enzyme.
    
  0.431
A0A178A963
Mov34-domain-containing protein.
    
  0.417
A0A178ATR9
Uncharacterized protein.
  
 
   0.415
A0A178B3U3
Amidase signature enzyme.
    
  0.412
A0A178AHJ5
Zn(2)-C6 fungal-type domain-containing protein.
  
 
  0.405
A0A178B125
Ubiquitin-like protein.
    
  0.404
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.