Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ABY0GH16 domain-containing protein. (367 aa)    
Predicted Functional Partners:
A0A178B9Q6
Phosphodiesterase.
    
 0.775
A0A178B8B3
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.696
A0A178ACJ9
PP2C-domain-containing protein.
    
 0.663
A0A178BD44
P-loop containing nucleoside triphosphate hydrolase protein.
    
  0.613
A0A178B269
GMP synthase.
    
  0.566
A0A178B8J5
Uncharacterized protein.
    
 0.546
A0A178B8K5
Ribokinase-like protein.
    
 0.534
A0A178AJ31
Uncharacterized protein.
    
 0.533
A0A178AT17
Histone H2B; Belongs to the histone H2B family.
    
  0.533
A0A178AJV5
Purple acid phosphatase.
     
 0.512
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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